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Multiple Files

Add Structures

  1. Image Removed In  In the Parameter Window select 'Global'. Then in the display window hit 'ctrl' and select your scans, highlighting them as seen below in Figure 16.

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Figure 16. Add STR files to multiple scans at once once 

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2. Back in the Parameter Window, right click on 'Global' and select 'Load STR(s) for Selected Files' (Figure 17).

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Figure 17.

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The 'Global' pathway to Load STR(s) 

3. Select the minerals from the pop up window (Figure 18). You can search through the mineral groups or start typing in the mineral and it will appear in the bar

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Figure 18. STR Library

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4. Now when the scan is expanded in the parameter window a mineral structure is included at the bottom (Figure 19).

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Figure 19. Structures present in parameter window under range tree

Run Refinement

TOPAS can run this refinement if multiple scans are loaded in, but there can only be one scan active at a time or the refinement will run the most recent scan and apply that data for all scans.

  1. Go to the parameter window and look at all the scans loaded in.
  2. Figure 21. One Active Scan and one inactive scan Image Removed Image Removed Figure 20. Two Active ScansThe The colored box next to the scan indicates that a scan is active. Clicking on the box alternates it between 'active' and 'inactive'. In Figure 20 there are two active scans, quartz is blue and Illite is black. In Figure 21 the white box next to Illite illustrates that this scan is now inactive.
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    Figure 20. Two Active Scans


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    Figure 21. One Active Scan and one inactive scan

  3. One scan can be run at a time so click on the colored boxes next to all but one scan. After this there should only be one scan seen on the graph.
  4. Go to the refinement window and select 'Play'.
  5. The message will appear stating the refinement converged and asking to accept or deny the refinement. Check the data before selecting an answer.
  6. In the upper right corner, the weight percent of each mineral appears. Check the areas by following instructions listed in Part 5.

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  1. Select 'File' on the Menu Bar and go to 'Save project As…' (Figure 22)
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    Figure 22. Save Project Pathway

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    2.  Navigate to a place on the desktop on server and save the file.

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To print or export the graph as image follow the steps below.

  1. Image Removed Select  Select the printer icon on the toolbar Image Removed (Figure 23)

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Figure 23.

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Printer Icon

2.  This brings up the 'Chart Options' Box. Select 'Print / Print Setup' (Figure

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24)

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Figure 24. Print

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Setup Window

3. Select the dropdown menu to select a printer. Choose 'Microsoft XPS Document Writer' to get a digital image of the graph (Figure

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25). Then select 'Print'.

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Figure 25. Print Window with Printer drop-down highlighted